YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134024978, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGVLLCWCL GASVLLYVLY SWLIPAAVQF NGSLALLWHD VIVERALDSL TRSTRPQRLL  60
   61 KAVKQHATRG DPQSVISAID HFCRHREWAM NVGDEKGCIL DSVVSELNPE KVLELGTYCG 120
  121 YSTVRIARLL PPGARLITLE FNPDYAVIAR QVIAWAGIED KVQLVEGASE DWIPRMKEHF 180
  181 GIETFDLVFL DHWKDHYLPD TKLMEGCGLL RKGTVLLADN VICPGVPDYL EYVRNSRSYK 240
  241 SCYFKSHLEY TRAEDGLEKS VFLG

Type	Start	End	Confidence
Signal Peptide	1	26	0.79
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	264	0.98