YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149069354, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDADSLLLSL ELASGSGQGL SPDRRASLLT SLMLVKRDYR FARVLFWGRI LGLVADYYIA  60
   61 QGLSEDQLAP RKTLYSLNCT EWSLLPPATE EMVTQTSVVS GRFMGDPSHE YEHTELQKVS 120
  121 EGDKVFDEEV VVQIKEETRL VSIIDQIDKA VAIVPRGALF KTPFGVTHVN RTFEGLPLSE 180
  181 IKKLSSYFHF REAIDLKNKT LLEKADLEPS LDFLDSLEYD IPRGSWSIQM ERGNALVVLR 240
  241 SLLWPGLTFY HAPRSKNYGY IYVGTGEKNM DLPFML

Type	Start	End	Confidence
Signal Peptide	1	17	0.41
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	276	0.95