YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IL2RA_RAT
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPHLLMLGF LSFTIVPGCW AELCLYDPPE VPNATFKALS YKNGTILNCE CKRGFRRLNE  60
   61 LVYMACLGNS WSNNCQCTSN SHDNSREQVT PQPEGQKEQQ TTDTQKSTQS VYQENLAGHC 120
  121 REPPPWRHED TKRIYHFVEG QIVLYTCIQG YKALQRGPAI SICKTVCGEI RWTHPQLTCV 180
  181 DEKEHHQFLA SEESQGSRNS FPESEASCPT PNTDFSQLTE ATTTMETFVF TKEYQVAVAS 240
  241 CIFLLLSILL LSGFTWQHRW RKSRRTI

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	235	0.99
Transmembrane Helix	236	256	0.96
Cytoplasmic	257	267	0.93