YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149028134
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVVQPSVF VVDGQTDIPF RRLGQNHRRR HCGTVQVSLA LLLLLGAGLA TEGWFLLRLH  60
   61 QRLGDIVAHL PDGGKGSWEK LIQDQRSHQP NPAAHLTGAN ASLIGIGGPL LWETQLGLAF 120
  121 LRGLTYHDGA LVTTEAGYYY VYSKVQLSGV GCPQGLANGL PITHGLYKRT SRYPKELELL 180
  181 VSRRSPCGRA NSSRVWWDSS FLGGVVHLEA GEEVVVRVPG NRLVRPRDGT RSYFGAFMI

Type	Start	End	Confidence
Cytoplasmic	1	31	0.95
Transmembrane Helix	32	54	0.87
Non-Cytoplasmic	55	239	0.59