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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125825554, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLHFHVGSS FNFQVFLCIC FASVGYGENV DVTTKATAGF PSKSPLWSSN DDTAGTEADK  60
   61 TNPELFTLNY ARIKIPFEIT LWVLLASFAK IGFNVYHKIT VWVPESCLLI SLGFVVGGVM 120
  121 HAVRKEPPAV ISSNVFFLYM LPPIILESGY FMPTRPFFEN VGTVMWFAVV GTLWNTMGIG 180
  181 ISLFAICQIE EFGVQDINLQ ENLLFAAILS AVEPVAVLSV FEDISINEQL YIVMFGECLF 240
  241 NDAVTVVLYN LFNHVAAMEV DEPAVIFMDI GGFFVVGLGG IFFGLLFGFL TAFTTRFTGK 300
  301 VREIEPLVIF MFSYMSYLIA ELFALSSIMA ILICTLSMKY YVEENVSQRS CTTIRHVIKM 360
  361 VGSVSETLIF FFLGVVSITT EHEWNWGYIL FTLFFTLFWR FLGILVLTQI INPFRKIPFN 420
  421 FQDQFGLAYG GLRGALSFAL AFTLPNSIPH RKLFITDTIA VIIFTVFIQG ITIRPLLKLM 480
  481 NIRKTNRNLE TINDEIHKRL MEHTVAGIED LCGQWSHYRW KDMFMKFNNR FIRKILIRDN 540
  541 RPESSIVSLY KKLELRNALE ILDTMSGDIS AAPSLMSLYE ERKNASKHKK FLPSDVENMH 600
  601 ELLSKNMYKI RQRTVSYTNR HSLPNENIAK EILMRRHTTI RSSLRSGSFH ATNSANTSHK 660
  661 FSSLPVGQSL NSGFPPGRFR HTDHIDAESE TAYPSNRSTF RHQRRSSSKA GIPLRPLNDL 720
  721 REDNEPNEEI PYKMSHPRSK FRHSGHQTSR QYYGTSRNCR DTDFEEQQSS LSPHGWTEEP 780
  781 QNNSDVQHPL MRKPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle