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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ICAM1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTRARPML PLLLVLVAVV IPGPVGAQVS IHPTEAFLPR GGSVQVNCSS SCEDENLGLG  60
   61 LETNWMKDEL SSGHNWKLFK LSDIGEDSRP LCFENCGTTQ SSASATITVY SFPERVELDP 120
  121 LPAWQQVGKN LILRCLVEGG APRTQLSVVL LRGNETLSRQ AVDGDPKEIT FTVLASRGDH 180
  181 GANFSCFTEL DLRPQGLSLF KNVSEVRQLR TFDLPTRVLK LDTPDLLEVG TQQKFLCSLE 240
  241 GLFPASEAQI YLEMGGQMLT LESTNSRDFV SATASVEVTE KLDRTLQLRC VLELADQTLE 300
  301 MEKTLRIYNF SAPILTLSQP EVSEGDQVTV KCEAHGGAQV VLLNSTSPRP PTSQGTSPRP 360
  361 PTSQIQFTLN ASPEDHKRRF FCSAALEVDG KSLFKNQTLE LHVLYGPHLD KKDCLGNWTW 420
  421 QEGSQQTLTC QPQGNPAPNL TCSRKADGVP LPIGMVKSVK REMNGTYKCR AFSSRGSITR 480
  481 DVHLTVLYHD QNTWVIIVGV LVLIIAGFVI VASIYTYYRQ RKIRIYKLQK AQEEALKLKV 540
  541 QAPPP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle