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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|194399718, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHSLSLRLL YLGLMCGKGL VFAQGSELFS QASDANKGPH LTGCRSSEQV TFRCWWSSGT  60
   61 FQNLSEPGAL RIFYQTKALS SDWYECPDYT QTVKNECYFN KTFTRIWTSY CIQLRSVPQN 120
  121 TTYDEACFTV ENIVYPDPPV GLNWTLLNVS RSGLHFDVLV RWTPPPSADV KTGWMSLVYQ 180
  181 LQYRVKNNTY WEMQELESGT QQSIYGLHTD KEYEVRVRCK MSAFNNFGEF SDSVFLQVAQ 240
  241 IPSKESTFPM ALVLSFILIG VVILLIFIVI SQQQRLMVIF LPPIPAPKIK GIDPELLKNG 300
  301 KLDQLDSLLS SHDMYKPDFY HEDPWVEFIQ LDIDDPADKK NSDTQHLLGL SHSGSSHNLN 360
  361 LKNDDDSGRA SCYDPEIPDP EDLASLLPNH SEQGEHQHSL VSRSSSANPD FQQESEVVET 420
  421 PIQTQPSWVN MDFYAQVSDF TPAGEVMLSP GQLNTSPEKK KKEEENEKKI QFQLVSDGAY 480
  481 TSETTARQFS ADVPSSPGPE QEYQAFPTQG VEGNLWNGDY LVSVNDSQTP YLLLEPPPAP 540
  541 VLPPISDYTV AEPPSKSSFL AAYGLSAQPR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle