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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|181332992, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METVWRSLAC VGIMAMVASG GAESWSDEKF AQSQAEFLSS LGQYEIAIPV RVGPHGETLS  60
   61 EEETSHGTVR HRRSTETQSA PEPQLYYQLS TSSTDLLLNL TLQGGLLSRQ FRVEYWKRGR 120
  121 LAWSHPYLPS CHYVGHLQHQ PHSSSVALSN CNGLQGVIVA GGEEYLIEPL VSAKNLTNED 180
  181 GREGRPHVVY KRSSLRYQNM DQSCGVIDEK PGKSYGWWQR TIKPSPNQMG RGQLPLKRSV 240
  241 SRERFVETLV VADKMMVSYH GRRDIEQYIL AVMNIVAKLF QDSSLGNAVN IVVTRLILLM 300
  301 EDQPTLEVNH HAGKSLDSFC KWQKSILHRN GHGNAIPDNG IAHHDTAVLI TRYDICIYKN 360
  361 KPCGTLGLAP VGGMCEPERS CSINEDIGLA TAFTIAHEIG HTFGMNHDGV GNACGVRSQE 420
  421 TAKLMAAHIT MKTNPFVWSA CSRDYITNFL DSGMGSCLNN VPPKQEFVYP TTAPGQAYDA 480
  481 DEQCRFQYGV KSRQCKYGEV CSELWCMSKG NRCITSSIPA AEGTICQTST IEKGWCYKRL 540
  541 CVPYGTRPEG VDGGWGHWSP WEECSRTCGG GVSSSIRHCD SPRPTVGGKY CLGERKRFRS 600
  601 CNIDECPVGS QDFREIQCSD FDSVPFRGKF YTWKPYRGGG VKSCSLNCLA EGYNFYTERA 660
  661 PAVVDGTPCR DDSLDVCVNG ECKHVGCDRI LGSDVREDRC RVCGGDGSSC QVIEGVFNDS 720
  721 LSEGGYEEVV RIPKGSVFIH IQELNISLNY LVLKSKGDQY FINGKLTIDT PRRFDIAGGT 780
  781 FHYRRPANEP ETLEALGPTN MTLIVMVLVR EENPGILYRF NPPVSRDPLS SYSWHYTSWS 840
  841 RCSALCAGGV QVQQVVCKKQ ADLSVVYNHF CDKKNKPKDK KRPCNQEPCP PTWWTGDWSE 900
  901 CSRSCNGGVR TREVLCKRKM SVTEEKVLDD TACTTTRPSV TEPCNNHTCP PEWHALDWSE 960
  961 CTPGCGPGYR YRVILCRSGD NGETLPESEC PKQSRPTTRV RCNIQRCPPP QWVAGPWGEC1020
 1021 SARCGMGQEI RFVQCLTHTG QPSNECPESH RPAFMQQCKS KCDHSGPTDN PEECKDVNTV1080
 1081 AYCPLVLRFK FCGRAYFRQM CCKTCQGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle