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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125823371, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRGCGATS CYTTKTKLNS FYSFLCAFIT CVSLCPVLCE AGLYTASDQV IVLTPENVDS  60
   61 TLFNNTAALL VEFYATWCGH CIAFSPVWKS LARDIKEWKP AVDLAAIDCA NESNRKVCTN 120
  121 FGITGYPSIK FFHAYSSIGS RGLEVRGFSR DVRGLRQYII ENLELHTEAW PPACPPLETA 180
  181 SEAEVHHFFP ANNVKYLALV FENKKSYVGR EVTLDLLQYE NIAVRRVLDT ETNLVSRFGV 240
  241 TEFPSCYLYD SSGNITRLKV LKEARTFYSY ALQRLPGVVR TGKHQTPITE LIKNSTLQEW 300
  301 RPFNKSRVYM SDLESALHYS LRVELSSHTS ISGDDLIALK KYINVLAKYF PGRPSVKSAL 360
  361 QAVDSWLQSQ KGTEIKYSDF RDVLDNVVQT SDAVLPEGVQ WVGCQGSQAR YRGYPCAVWT 420
  421 LFHVLTVQAK EMGSTVSEPQ EVLLAMRGYV SSFFGCRPCA THFEAMAAES MDQVNSLSGA 480
  481 VIWLWSRHNR VNNRLAGDLS EDPHFPKIQW PSPELCPSCH GVTIIGDHNW IKDEVPQFLQ 540
  541 NYFSSSRILN DYLQDETQAL IQQRNRLTAA RMEKEAGRGA DRRARDIFDN NPADEPQEEE 600
  601 EEEEEEEPTF EEQAVEPYPA GLEGAPGADQ APWEKPQPLS SQRKPKIVGM KLREAQEDIV 660
  661 DLDYFVSQHY KAKALRAAAM SGVVRRRSLQ KKEDVEDLQF EGGWRVKRDL GSQEENFGIE 720
  721 PYPRAQSKHW MSLLSVGFSR LDVSLCVLLY LLSTMCLLAM YMYFKLRIKL RSAKVSLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle