YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148922843, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLSLYALVA FVWGLTGISA SFVPCEPCDQ KAMSMCPPVR NGCQVVKEPG CGCCLTCALI  60
   61 EGQACGVYTG TCGRGLRCLP RIGEEKPLHA LLYGKGVCMN EKLSPYKSMH MPKDQESDED 120
  121 GMVSEVTEDL LPQAKVPLFQ RDHINSKKAQ AMRKDRKRQQ AKLRTRSHVD YSLFGMEKHQ 180
  181 SDIGPCRRKL DGIVQRMKDT SRVMALSLYL PNCDKKGFFK RKQCKPSRGR KRGICWCVDK 240
  241 HGVQMPGTDF NGGNIQCKEV ESHSNNNE

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	268	0.99