YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UNC50_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSTSLNSS MYGNGALNSR DAARHTAGAK RYKYLRRLFR FRQMDFEFAA WQMLYLFTSP  60
   61 QRVYRNFHYR KQTKDQWARD DPAFLVLLSI WLCVSTIGFG FVLDMGFFET IKLLLWVVFI 120
  121 DCVGVGLLIS TLMWFISNKY LVKRQSRDYD VEWGYAFDVH LNAFYPLLVI LHFIQLFFIN 180
  181 HVILTDTFIG YLVGNTLWLI AVGYYIYVTF LGYSALPFLK NTVVLLYPFA PLIVLYGLSL 240
  241 ALGWNFTHTL CSFYKYRVK

Type	Start	End	Confidence
Cytoplasmic	1	82	0.71
Transmembrane Helix	83	105	0.89
Non-Cytoplasmic	106	112	0.50
Transmembrane Helix	113	136	0.91
Cytoplasmic	137	156	0.53
Transmembrane Helix	157	179	0.79
Non-Cytoplasmic	180	187	0.41
Transmembrane Helix	188	216	0.73
Cytoplasmic	217	222	0.45
Transmembrane Helix	223	246	0.84
Non-Cytoplasmic	247	259	0.53