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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IPI:IPI00196763....
Protein type: Globular with Signal Peptide
Type Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFGLLVAG VADGCDLVPR HLRGRRASGS AGAAASPSAA AAGERQALLT DPCMSLSPPC  60
   61 FTEEDRFSLE ALQTIHKQMD DDKDGGIEVD ESDEFIREDM KYKDATNKHS HLHREDKHIT 120
  121 VEDLWKQWKT SEVHNWTLED TLQWLIEFVE LPQYEKNFRD NNVKGTTLPR IAVHETSFMI 180
  181 SQLKISDRSH RQKLQLKALD VVLFGPLTRP PHNWMKDFIL TISIVIGVGG CWFAYTQNKT 240
  241 SKEHVAKMMK DLESLQTAEQ SLMDLQERLE KAQEENRTVA VEKQNLERKM MDEINYAKEE 300
  301 ACRLRELREG AECELSRRQY AEQELEQVRM ALKKAEKEFE LRSSWSVPDA LQKWLQLTHE 360
  361 VEVQYYNIKR QNAEMQLAIA KDEAEKIKKK RSTVFGTLHV AHSSSLDEVD HKILEAKKAL 420
  421 SELTTCLRER LFRWQQIEKI CGFQIAHNSG LPSLTSSLYS DHSWVVMPRV SIPPYPIAGG 480
  481 VDDLDEDTPP IVSQFPGTVA KPAGSLARSS SLCRSRRSIV PSSPQSQRAQ LPAHAPLAAH 540
  541 PRHPHHPQHS LPSPDPDILS VSSCPALYRN EEEEEAIYFT AEKQWEVPDT ASECDSLNSS 600
  601 IGRKQSPPSS LEIYQTLSSR KISRDELSLE DSSRGDSPVT ADVSRGSPEC VGLTETKSMI 660
  661 FSPASRVYNG ILEKSCSMHQ LSSGIPVPNP RHTSCSLAGS DSKPVQEASS VSRVGSIPHD 720
  721 LCHNGEKSKK PSKIKSLFKK KSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle