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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CP2C7_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLVTFLVLT LSSLILLSLW RQSSRRRKLP PGPTPLPIIG NFLQIDVKNI SQSLTKFSKT  60
   61 YGPVFTLYLG SQPTVILHGY EAIKEALIDN GEKFSGRGSY PMNENVTKGF GIVFSNGNRW 120
  121 KEMRRFTIMN FRNLGIGKRN IEDRVQEEAQ CLVEELRKTK GSPCDPSLIL NCAPCNVICS 180
  181 ITFQNHFDYK DKEMLTFMEK VNENLKIMSS PWMQVCNSFP SLIDYFPGTH HKIAKNINYM 240
  241 KSYLLKKIEE HQESLDVTNP RDFVDYYLIK QKQANNIEQS EYSHENLTCS IMDLIGAGTE 300
  301 TMSTTLRYAL LLLMKYPHVT AKVQEEIDRV IGRHRSPCMQ DRKHMPYTDA MIHEVQRFIN 360
  361 FVPTNLPHAV TCDIKFRNYL IPKGTKVLTS LTSVLHDSKE FPNPEMFDPG HFLDENGNFK 420
  421 KSDYFLPFSA GKRACVGEGL ARMQLFLFLT TILQNFNLKS LVHPKDIDTM PVLNGFASLP 480
  481 PTYQLCFIPS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle