YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	WFDC1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSCDRKALW ALSFLLLLLG SSSVQGTWEA MLPVRLAEKS QAEEVAATGS RQPHADRCPP  60
   61 PPRTLPPGAC QATRCQSDSE CPRHRRCCYN GCAYACLEAV PPPPVLDWLV QPKPRWLGGN 120
  121 GWLLDGPEEV LQAEACSTTE DGAEPLLCPS GYECHILQPG DAAQGIPNHG RCVKQRRQAE 180
  181 GRVLRQKLHK EYPEGDSKYV AEPGKGQQRH FP

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	212	0.99