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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125806037, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAERANFGAQ RVSRPQGSLP PEPIDIIRTK ARSRRVRINV GGLVHEVLWR TLDRLPRTRL  60
   61 GKLRDCNTHE TLMEICDDYS LNDNEYFFDR HPGAFSSILN FYRTGKLHMM EEMCALSFGQ 120
  121 ELDYWGIDEI YLESCCQARY HQKKEQMNEE LRREAETLRE KEGDQVDTGC CPDKRQKLWD 180
  181 LLEKPSSSVA AKVLAIISIL FIILSTIALS LNTLPELQVI DEFGQSNDNP NLAHVEAVCI 240
  241 AWFTMEYLLR FLSSPNKWKF FKGPLNVIDL LAILPYYVTI FLTESNKSVL QFQNVRRVVQ 300
  301 IFRIMRILRI LKLARHSTGL QSLGFTLRRS YNELGLLILF LAMGIMIFSS LVFFAEKDED 360
  361 ATKFTSIPAS FWWATITMTT VGYGDIYPQT LLGKIVGGLC CIAGVLVIAL PIPIIVNNFS 420
  421 EFYKEQKRQE KAIKRREALE RAKRNGSIVS MNLKDAFARN MELLDVVIEK NEDKAADNHL 480
  481 SPSRWNYQKN PNSELGSKGF DSKYQEVGQL ASPERVFRST PSPQRLNAKS LEQMYNQMTA 540
  541 ASSMSSSGPS ASKVSTVVGR EEEMEMKVVQ CEPRLKEKPV TEIRSLSSVD SFASCATDIS 600
  601 EVERSALLPN FAGRHPRAPP PLDLSQITSL EKRAKQPTII KEGLYEFVPC KSDGSSTMSQ 660
  661 GEENQSFDQS DENVRSPPQG NQVKLKGLKV NFTESAEEGA SNLHLVVTDD VATLTPKVPV 720
  721 SDPLLLAGSP RQSPRATEGD GATSSPGFSL SSSESQRGRN HVDRAAVTPT SPKSAQNCAS 780
  781 ATAGAVGAED NIQSGQKVDN HLLSPDILKS SGDGGRSPPC ETSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle