YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MMP7_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAMRLTLFR IVCLLPGCLA LPLSQEAGEV TALQWEQAQN YLRKFYLHDS KTKKATSAVD  60
   61 KLREMQKFFG LPETGKLSPR VMEIMQKPRC GVPDVAEFSL MPNSPKWHSR TVTYRIVSYT 120
  121 TDLPRFLVDQ IVKRALRMWS MQIPLNFKRV SWGTADIIIG FARGDHGDNF PFDGPGNTLG 180
  181 HAFAPGPGLG GDAHFDKDEY WTDGEDSGVN FLFVATHELG HSLGLGHSSV PSSVMYPTYQ 240
  241 GDHSEDFSLT KDDIAGIQKL YGKRNKL

Type	Start	End	Confidence
Signal Peptide	1	27	0.91
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	267	0.99