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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|133777406, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLAVLFSA VMLLSVVSVR TEKHSLYYIY TALSRPVDQS GIYQFTAMGL LDDRQIDYYN  60
   61 NIDQKKIPKQ HWMKEKMQED YWEKGTQSRK SKEQWFNVNV NILMDRMRHN NSDLHVLQWR 120
  121 HGCEIEIQGN EHRFSKGIDE YSYDGRNFLS FDDAESQWVA PVDAALPTKR KWDNVPILNQ 180
  181 YTKGYLEKEC VDWLNKFREY GDQELRDGSP PDVYVFARRI ISGKIKLKLT CMATGFYPKD 240
  241 MILTIRKYRT TLPDNDLDSS GVRPNQDGTF QLRKSTNIYE DEKAEYDCYV NHRTLKEPII 300
  301 VRWNGEYLSE PPIAIIAAII GVLILLVAIG VTVWILKKKN IIGNKDEKRS MPNGSANYGR 360
  361 GSSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle