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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51854223, gi|...
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSKETPEE PLVGAVVQGT NSTRFLVFNP KTAELVGSHQ VELTQEYPKE GWVEEDPKEI  60
   61 LQSVYECIAK TCEKLTEANI DTSKIKAIGV SNQRETTVVW DKFTGEPLYN AVVWLDLRTQ 120
  121 STVESLNKKI PGNSNFVKSK TGLPLSTYFS AVKLRWMLDN LRPIQKAVEE DRALFGTIDS 180
  181 WLIWCMTGGV NGGIHCTDVT NASRTMLFNI HSLEWDKELC KFFEIPMSIL PNVRSSSEIY 240
  241 GQMTSGALEG VPISGCLGDQ SAALVGQMCF QEGQAKNTYG TGCFLLCNTG QKCVFSEHGL 300
  301 LTTVAYKLGK NKPAFYALEG SVAIAGAVIR WLRDNFELIT SSGEVEDLAR EVGTAYGCYF 360
  361 VPAFSGLYAP YWEPSARGII CGLTQFTNKC HIAFAALEAV CFQTREIVDA MNRDCGIPLS 420
  421 HLRVDGRMTN NKILMQLQAD ILHIPVVKSV MPETTALGAA MAAGAAEGID VWSIEPEDLS 480
  481 SMLMERYEPQ IQATESEIRF STWKRAVMKS MGWVTAKDPE SNANPVFACL PLGFFIVSSM 540
  541 TLLIGARCIS YAEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle