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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACHG_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHGGQGPQLL LLLLATCLGA QSRNQEERLL ADLMRNYDPH LRPAERDSDV VNVSLKLTLT  60
   61 NLISLNEREE ALTTNVWIEM QWCDYRLRWD PKDYEGLWIL RVPSTMVWQP DIVLGNNVDG 120
  121 VFEVALYCNV LVSPDGCIYW LPPAIFRSSC SISVTYFPFD WQNCSLVFQS QTYSTSEINL 180
  181 QLSQEDGQAI EWIFIDPEAF TENGEWAIRH RPAKMLLDPV TPAEEAGHQK VVFYLLIQRK 240
  241 PLFYVINIIV PCVLISSVAI LIYFLPAKAG GQKCTVATNV LLAQTVFLFL VAKKVPETSQ 300
  301 AVPLISKYLT FLMVVTILIV VNSVVVLNVS LRSPHTHSMA RGVRKVFLRL LPQLLRMHVH 360
  361 PRAPAAVQDA RLRLQNGSSS GWPIMTREEG DLCLPRSELL FRQRQRNGLV QAVLEKLENG 420
  421 PEMRQSQEFC GSLKQASPAI QACVDACNLM ARARHQQSHF DSGNEEWLLV GRVLDRVCFL 480
  481 AMLSLFICGT AGIFLMAHYN QVPDLPFPGD PRPYLPLPD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle