YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2RY1_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVPWSAVP NGTDAAFLAG LGSLWGNSTI ASTAAVSSSF RCALIKTGFQ FYYLPAVYIL  60
   61 VFIIGFLGNS VAIWMFVFHM KPWSGISVYM FNLALADFLY VLTLPALIFY YFNKTDWIFG 120
  121 DVMCKLQRFI FHVNLYGSIL FLTCISAHRY SGVVYPLKSL GRLKKKNAIY VSVLVWLIVV 180
  181 VAISPILFYS GTGIRKNKTV TCYDSTSDEY LRSYFIYSMC TTVAMFCIPL VLILGCYGLI 240
  241 VRALIYKDLD NSPLRRKSIY LVIIVLTVFA VSYIPFHVMK TMNLRARLDF QTPEMCDFND 300
  301 RVYATYQVTR GLASLNSCVD PILYFLAGDT FRRRLSRATR KASRRSEANL QSKSEEMTLN 360
  361 ILSEFKQNGD TSL

Type	Start	End	Confidence
Cytoplasmic	1	14	0.73
Transmembrane Helix	15	36	0.77
Non-Cytoplasmic	37	55	0.68
Transmembrane Helix	56	78	0.93
Cytoplasmic	79	87	0.77
Transmembrane Helix	88	111	0.89
Non-Cytoplasmic	112	128	0.82
Transmembrane Helix	129	150	0.84
Cytoplasmic	151	167	0.82
Transmembrane Helix	168	189	0.93
Non-Cytoplasmic	190	214	0.87
Transmembrane Helix	215	241	0.83
Cytoplasmic	242	257	0.80
Transmembrane Helix	258	278	0.93
Non-Cytoplasmic	279	311	0.86
Transmembrane Helix	312	328	0.46
Cytoplasmic	329	373	0.54