YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62665300, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPRFSSTV VLSLLIVQTG ILVFLVSRQM PSSPAGRGEH VHVLVLSSWR SGSSFVGQLF  60
   61 SQHPDVFYLM EPAWHVWDAL SQASAPALHM AVRDLIRSVF LCDMDVFDAY LPWRRNISDL 120
  121 FQWAVSRALC SPPVCDAFAR GNISSEEVCK PLCATRPFGL AQEACSSYSH VVLKEVRFFN 180
  181 LQVLYPLLSD PALNLRIVHL VRDPRAVLRS REQTAKALAR DNGIVLGTNG TWVEADPRLR 240
  241 VVSEVCRSHV RIAEVALHKP PPFLQDRYRL VRYEDLARDP LTVIRELYAF TGLGLTPQLQ 300
  301 TWIYNITHGS GPGARREAFK TTSRDALSVS QAWRHTLPFA KIRRVQELCA GALQLLGYRP 360
  361 VHSELEQRDL SLDLLLPRGM DSFKWASSTD KQPES

Type	Start	End	Confidence
Signal Peptide	1	34	0.79
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	395	0.99