YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|187469737, gi...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASRAAALG VRWLQRTSRC VVPLEARRAF HMTKDMMPGS YPRTPEERAA AAKKYNMRVE  60
   61 DYEPYPDDGM GYGDYPMLPN RSQHERDPWY EWDHPDLRLN WGEPIHWDLD MYIRNRVDTS 120
  121 PTPVSWDVMC RHLFGFVAFM VFMFWVGDMF PSYQPVGPKQ YPYNNLYLER GGDPSKEPEP 180
  181 VVHYEI

Type	Start	End	Confidence
Cytoplasmic	1	127	0.87
Transmembrane Helix	128	147	0.82
Non-Cytoplasmic	148	186	0.90