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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mgl-1
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSVLALAIQ ILANVNVVAQ TTEAVDLAPP PKVRQIRIPG DILIGGVFPV HSKSLNGDEP  60
   61 CGEIAETRGV HRVEAMLYAL DQINSQNDFL RGYKLGALIL DSCSNPAYAL NQSLDFVRDM 120
  121 IGSSEASDYV CLDGSDPNLK KQSQKKNVAA VVGGSYSSVS VQLANLLRLF RIAQVSPAST 180
  181 NADLSDKNRF EYFARTVPSD DYQAMAMVEI AVKFKWSYVS LVYSADEYGE LGADAFKKEA 240
  241 RKKGICIALE ERIQNKKESF TESINNLVQK LQPEKNVGAT VVVLFVGTEY IPDILRYTAE 300
  301 RMKLTSGAKK RIIWLASESW DRNNDKYTAG DNRLAAQGAI VLMLASQKVP SFEEYFMSLH 360
  361 PGTEAFERNK WLRELWQVKY KCEFDTPPGS TASRCEDIKQ STEGFNADDK VQFVIDAVYA 420
  421 IAHGLQSMKQ AICPDDAIEN HWISRYSKQP EICHAMQNID GSDFYQNYLL KVNFTGKTIS 480
  481 IFSSFRLSPF SDIVGKRFRF SPQGDGPASY TILTYKPKSM DKKRRMTDDE SSPSDYVEIG 540
  541 HWSENNLTIY EKNLWWDPDH TPVSVCSLPC KIGFRKQLIK DEQCCWACSK CEDYEYLINE 600
  601 THCVGCEQGW WPTKDRKGCF DLSLSQLKYM RWRSMYSLVP TILAVFGIIA TLFVIVVYVI 660
  661 YNETPVVKAS GRELSYILLI SMIMCYCMTF VLLSKPSAIV CAIKRTGIGF AFSCLYSAMF 720
  721 VKTNRIFRIF STRSAQRPRF ISPISQVVMT AMLAGVQLIG SLIWLSVVPP GWRHHYPTRD 780
  781 QVVLTCNVPD HHFLYSLAYD GFLIVLCTTY AVKTRKVPEN FNETKFIGFS MYTTCVVWLS 840
  841 WIFFFFGTGS DFQIQTSSLC ISISMSANVA LACIFSPKLW IILFEKHKNV RKQEGESMLN 900
  901 KSSRSLGNCS SRLCANSIDE PNQYTALLTD STRRRSSRKT SQPTSTSSAH DTFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle