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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-105
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDRIKSKL RRPASIESTM SSRTKPRHKP SPMSILMPHL MVGESFRKYR PHGLRNIRMN  60
   61 GHLDWNQLRK SFEKQSTFHG ISHAATADGK WRWFWYTAFT ICLLALLIQI FFLISKYRQY 120
  121 GKTVDLDLKF ENAPFPSITI CNLNPYKKSA IQSNPNTKAM MEAYSRRIGS GDKTEGIAAA 180
  181 LSATGGLHAK VRRAKRKAKG KPRLRDRRYH QAFAQCLCDI EQLTGDRKGS CFAAFKGKIE 240
  241 IDTNNTAGFM NLHTSRCLCQ LDTVSKALWP CFPYSSWKEK LCSECVDNTG HCPMRFYKGN 300
  301 ELYENIKEQV DLCLCHKEYN HCVSTRDDGI ILEISPNDEL NDLDIGKKIA SQLSAQQEKQ 360
  361 AEVTTTEAPT VTQALGFEEL TDDIAITSQA QENLMFAVGE MSEKAKESMS YELDELVLKC 420
  421 SFNQKDCQMD RDFTLHYDNT FGNCYTFNYN RTAEVASHRA GANYGLRVLL YANVSEYLPT 480
  481 TEAVGFRITV HDKHIVPFPD AFGYSAPTGF MSSFGVRMKQ FIRLEPPYGH CRHGGEDAAT 540
  541 FVYTGFQYSV EACHRSCAQK VIVEACGCAD PMYPVAEMFG NNTKPCQAVN MDQRECLRNT 600
  601 TLWLGELYSK GKEAIIPDCY CHQPCQETNY EVTYSSARWP SGSAKVMECL PGDFLCLEKY 660
  661 RKNAAMVQIF YEELNYETMQ ESPAYTLTSV LADLGGLTGL WIGASVVSLL EIVTLIVFAT 720
  721 QAYVRKRKGS ISAQSHHSVP VHRASRVSLN TLHKSSTTQS VKLSVMDIRS IKSIHSNHSS 780
  781 KSKQSILIED LPPAIQEQSD DEEETTESSR TNGSCRYLAP GEDLPCLCKY HPDGSIRIMK 840
  841 ALCPVHGYMV RRNYDYSVSN SEEEDAEDEV HREPEPFYSA PYEHRKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle