YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GILT_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCSPLVPFL SLLLLLFLPE VPRAATASLP QGSSEGAATC KAHDLCLFGP RRLLSAPPVN  60
   61 VSLYYESLCG ACRYFLVRNL FPTWLMVMEI MNITLVPYGN AQERNVSGTW EFTCQHGELE 120
  121 CKLNKVEACL LDKLEKEAAF LTIVCMEEME DMEKKLGPCL QLYVPEVSPE SIMECATGKR 180
  181 GTELMHENAQ LTDALQPPHE YVPWVLVNEK PLTDPSQLLS SVCELYQGTE KPDICSSMAD 240
  241 APREVCYK

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	248	0.99