YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KRBBA_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTAVVYADL HLARTGEPKR EPPPSLSPDT CQCPRWHRLA LKLGCACLIL LVLSVIGLGV  60
   61 LVLTLLQKPL IQNSPADVQE NRTKTTDSPA KLKCPKDWHS HQDKCFHVSQ TSITWKGSLA 120
  121 DCGGKGATLL LVQDQEELRF LRNLTKRISS SFWIGLSYTL SDEKWKWING STLNSDALNI 180
  181 TGDTEKDSCA SVSQDKVLSE SCDSDNIWIC QKELKRESTC NDS

Type	Start	End	Confidence
Cytoplasmic	1	42	0.97
Transmembrane Helix	43	65	0.93
Non-Cytoplasmic	66	223	0.99