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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3062827, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRNQLHSWL NAVLFGLLLL LIHVQGQDSP ESSPIRTTHT GQVQGKLDHV KDTKAGVHTF  60
   61 LGIPFAKPPV GPLRFAPPEP PEPWSGVRDA TSQPAMCLQN LDILDEVGLL DMKMILSSIS 120
  121 MSEDCLYLNV YAPAHAREGS NLPVMVWIHG GALVVGMASM YDGSLLTVNE DLVVVTIQYR 180
  181 LGVLGFFSTG DEHARGNWGY LDQVAALRWV QQNIAHFGGN PNRVTIFGES AGGTSVSSHV 240
  241 ISPMSQGLFH GAIMESGVAL LPDLISETSE TVSTTVAKLS GCEAMDSEAL VRCLRAKSGA 300
  301 EILVINKVFK MIPAVVDGEF LPRHPKELLA SEDFHPVPSI IGVNTDEYCC TIPMVMGTAQ 360
  361 IIKELSRENL QAVLKDTAAQ MMLPPECGDL LMEEYMGNTD DSQTLQIQYT EMMGDFLFVI 420
  421 PALQVAHFQR SHAPVYFYEF QHAPSYFKNV RPPHVKADHA DEVPFVFGSF FSGMKLDFTE 480
  481 EERLLSRRMM KYWANFARQG NPNSEGLPYW PALDHDEQYL QLDTHPAVDR ALKARRLQFW 540
  541 TKTLPQKIEE LNGAQKNHAE L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle