YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IFNA1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLCAFLMS LVVVSYWSAC CLGCDLPHTH NLRNKRVFTL LAQMRRLSPV SCLKDRKYFG  60
   61 FPLEKVDGQQ IQKAQAIPVL HELTQQILSL FTSKESSTAW DATLLDSFCN DLQQQLSGLQ 120
  121 ACLMQQVGVQ ESPLTQEDSL LAVREYFHRI TVYLRENKHS PCAWEVVKAE VWRALSSSAN 180
  181 LMGRLREERN ES

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	192	0.99