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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19923703, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKVWWHTAW GLLCLLQLSL AQQQIDLNIT CRYAGVFHVE KNGRYSISRT EAADLCEAFN  60
   61 TTLPTMAQME LALRKGFETC RYGFIEGHVV IPRIHPNAIC AANNTGVYIL LASNTSHYDT 120
  121 YCFNASAPLE EDCTSVTDLP NSFDGPVTIT IVNRDGTRYS KKGEYRTHQE DIDASNIIDE 180
  181 DVSSGSTIEK STPEGYILHT DLPTSQPTGD RDDAFFIGST LATIASTVYS KSHATAQKQN 240
  241 NWIWSWFGNS QSTTQTQDSP TTTATTALMT TPETPPKRQE AQNWFSWFFQ PSESKSHLHT 300
  301 TTKMPGTESN TNPTGWKPNE ENEDETDKYP NFSGSGIDDD EDFISSTIAT TPWVSAHTKQ 360
  361 NQERTQWNPI HSNPEVLLQT TTRMTDIDRN STSAHGENWT QEPQPPFNNH EYQDEEETPH 420
  421 ATSTTWADPN STTEEAATQK EKWFENEWQG KNPPTPSEDS HVTEGTTASA HNNHPSQRMT 480
  481 TQSQEDVSWT DFFDPISHPM GQGHQTESKD TGSSHSTTLQ PTAAPNTHLV EDLNRTGPLS 540
  541 VTTPQSHSQN FSTLPGELEE GEDHPTTSVL PSSTKSGRRR GGSLPRDTTT SLEGYTPQYP 600
  601 DTMENGTLFP VTPAKTEVFG ETEGTVATDS NFNVDGSLPG DGDSSMDPRG GFDTVTHGSE 660
  661 LAGHSSGNQD SGVTTTSGPA RRPQIPEWLI ILASLLALAL ILAVCIAVNS RRRCGQKKKL 720
  721 VINSGNGTVE DRKPSELNGE ASKSQEMVHL VNKEPTETPD QFMTADETRN LQSVDMKIGV 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle