YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPP24_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELATMKTLV MLVLGMHYWC ASGFPVYDYD PSSLQEALSA SVAKVNSQSL SPYLFRATRS  60
   61 SLKRVNVLDE DTLVMNLEFT VQETTCLRES GDPSTCAFQR GYSVPTAACR STVQMSKGQV 120
  121 KDVWAHCRWA STSESNSSEE MIFGDMARSH RRRNDYLLGF LYDEPKGEQF YDRSIEITRR 180
  181 GHPPAHRRFL NLQRRARVNS GFE

Type	Start	End	Confidence
Signal Peptide	1	23	0.68
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	203	0.99