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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75517612, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVLSGPT TGSPAGAPGG PGGLSAAGSG PRLRLLLLES VSGLLQPRTG SHVAPVHPPI  60
   61 QWAPYLPGLM CLLRLHGTAG GAQNLSALGA LVNLSNAHLS SIKTRFEGLC LLSLLVGESP 120
  121 TELFQQHCVS WLRSIQQVLQ SQDSPPTMEL AVAILRDLLR YASQLPTLFR DISTNHLPGL 180
  181 LTSLLGLRPE CEQSALEGMK ACVTYFPRAC GFLKGKLASF FLSRLDSLNP QLQQLACECY 240
  241 SRLPSLGAGF SQGLKHTENW EQELHSLLTS LHSLLGSLFE ETETAPVQSE GPGVEMLLSP 300
  301 SEDDNTHVLL QLWQRFSGLA RCLGLMLSSE FGAPVSVPVQ EILDLICRIL GISSKNINLL 360
  361 GDGPLRLLLL PSLHLEALDL LSALILACGG RLLRFGALIS RLLPQVLNTW STGRDALAPG 420
  421 QERPYSTIRT KVYAILELWV QVCGASAGML QGGASGEALL THLLSDISPP ADALKLCSTR 480
  481 GSSDGGLQSG KPSAPKKLKL DMGEALAPPS QRKGDRNANS DVCAAALRGL SRTILMCGPL 540
  541 VKEETHRRLH DLVLPLVMSV QQGEVLGSSP YNSSCCRLEL YRLLLALLLA PSPRCPPPLS 600
  601 CALKAFSLGQ WEDSLEVSSF CSEALVTCSA LTHPRVPPLQ SSGPACPTPA PVPPPEAPSS 660
  661 FRAPAFHTPG PMPSIGALPS PGPVPSAGPI PTVGSMSSAG SVPSTGPVPS RPGPPATANH 720
  721 LGLAVPGLVS VPPRLLPGSE NHRAGSGEDP VLAPSGTPPP SIPPDETFGG RVPRPAFVHY 780
  781 DKEEASDVEI SLESDSDDSV VIVPEGLPSL PPPPSGTPPP VAPTGPPTAS PPVPAKEDSE 840
  841 ELPATPGPLP PPPPPPPPVS GPVTLPPPQL VPEGTPGGGG PTAMEEDLTV ININSSDEEE 900
  901 EEEEEEEEED EDEEEEDFEE EEEDEEEYFE EEEEEEEFEE EFEEEEGELE EEEEEEEEEL 960
  961 EEVEDVEFGS AGEVEEGGPP PPTLPPALPP TDSPKVQPEA EPEPGLLLEV EEPGAEDGPG1020
 1021 PEIAPTLAPE VLPSQEEVER EGESPTAGPP QELVEEESSA PPTLLEEGTE GGGDKVPPPP1080
 1081 ETPAQEEMET ETEASAPQGK EQDDTAAMLA DFIDCPPDDE KPPPATEPDS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle