YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PLAC1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIKFLGGV VFFTLMFSGY SEQNQVNVLC STDWFMVTVH PFLLNNDVFV HFYEVHLGLG  60
   61 CPPNHIHPHF YQFNYRVTEC GIRIKAVSPD VVIYSSEIHY ASKGSSARYV IPVSCAAPRR 120
  121 SPWLTKPYSA KAPSSNMGAT PKNDTSYHVF TLPEPSQQPN CSCPPYVFNQ KSM

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	173	0.99