YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ORML3_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVGTAHSEV NPNTRVMNSR GIWLSYVLAI GLLHVVLLSI PFVSVPVVWT LTNLIHNLGM  60
   61 YIFLHTVKGT PFETPDQGKA RLLTHWEQMD YGVQFTASRK FLTITPIVLY FLTSFYTKYD 120
  121 QVHFILNTVS LMSVLIPKLP QLHGVRIFGI NKY

Type	Start	End	Confidence
Cytoplasmic	1	21	0.90
Transmembrane Helix	22	45	0.87
Non-Cytoplasmic	46	121	0.54
Transmembrane Helix	122	139	0.48
Cytoplasmic	140	153	0.58