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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23558774, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALARCVLAV ILGVLSEVAR ADPVLHSPLH RPHPSPPRSQ HAHYLPSSRR PPRTPRFPLP  60
   61 PRAPAAQRPQ LLSTRHTPPT ISRRCGAGEP WGNATNLGVP CLHWDEVPPF LERSPPASWA 120
  121 ELRGQPHNFC RSPDGAGRPW CFYRNAQGKV DWGYCDCGQG PALPVIRLVG GKSGHEGRVE 180
  181 LYHAGQWGTI CDDQWDDADA EVICRQLGLS GIAKAWHQAH FGEGSGPILL DEVRCTGNEL 240
  241 SIEQCPKSSW GEHNCGHKED AGVSCAPLTD GVIRLSGGKS VHEGRLEVYY RGQWGTVCDD 300
  301 GWTEMNTYVA CRLLGFKYGK QSSVNHFEGS SRPIWLDDVS CSGKEASFIQ CSRRQWGRHD 360
  361 CSHREDVGLT CYPDSDGHRL SPGFPIRLMD GENKREGRVE VFVNGQWGTI CDDGWTDKHA 420
  421 AVICRQLGYK GPARARTMAY FGEGKGPIHM DNVKCTGNEK ALADCVKQDI GRHNCRHSED 480
  481 AGVICDYYEK KTSGHGNKET LSSGCGLRLL HRRQTRIIGG NNSLRGAWPW QASLRLKSTH 540
  541 GDGRLLCGAT LLSSCWVLTA AHCFTRYGNN SRSYAVRVGD YHTLVPEGFE QDIGVQQIVI 600
  601 HRNYRPDSSD YDIALVRLQG SGEQCARLST HVLPACLPLW RERPQKTASN CHITGWGDTG 660
  661 RAYSRTLQQA AVPLLPKRFC KERYKGLFTG RMLCAGNLQE DNRVDSCQGD SGGPLMCEKP 720
  721 DETWVVYGVT SWGYGCGIKD TPGVYTRVPA FVPWIKSVTS L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle