YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IAH1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLCELAASG SSLLWPRVLL FGDSITQFSF QQGGWGTLLA DRLVRKCDVL NRGFSGYNTR  60
   61 WAKIILPRII RKGAGLENPV AVTIFFGAND STLKDENPKQ HVPLDEYSAN LRDMVQYLRS 120
  121 VDIPKERVIL ITPPPLCEAA WEKECILKGC KLNRLNVAVG EYAKACLQVA RDCGTDVLDL 180
  181 WTLMQKDNQD FSSYLSDGLH LSPLGNEFLF FHLWPLLDKK VSSLPRLLPD WKDVEETKPE 240
  241 LSLLGDGDH

Type	Start	End	Confidence
Signal Peptide	1	20	0.63
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	249	0.99