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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CP2CC_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPFVVLVLS LSFLLLLYLW RPSPGRGKLP PGPTPLPIFG NFLQIDMKDI RQSISNFSKT  60
   61 YGPVFTLYFG SQPTVVLHGY EAVKEALIDY GEEFSGRGRM PVFEKATKGL GISFSRGNVW 120
  121 RATRHFTVNT LRSLGMGKRT IEIKVQEEAE WLVMELKKTK GSPCDPKFII GCAPCNVICS 180
  181 IIFQNRFDYK DKDFLSLIEN VNEYIKIVST PAFQVFNAFP ILLDYCPGNH KTHSKHFAAI 240
  241 KSYLLKKIKE HEESLDVSNP RDFIDYFLIQ RCQENGNQQM NYTQEHLAIL VTNLFIGGTE 300
  301 TSSLTLRFAL LLLMKYPHIT DKVQEEIGQV IGRHRSPCML DRIHMPYTNA MIHEVQRYID 360
  361 LAPNGLLHEV TCDTKFRDYF IPKGTAVLTS LTSVLHARKE FPNPEMFDPG HFLDENGNFK 420
  421 KSDYFMPFSA GKRKCVGEGL ASMELFLFLT TILQNFKLKS LSDPKDIDIN SIRSEFSSIP 480
  481 PTFQLCFIPV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle