YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25006237
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVPLLLVL GLLFVLGLLF AGPVAPSRLI SKRPSQLGGF SWDNCDEGKD PAVIKSLTLQ  60
   61 PDPIVVPGDV IVSAEGKTSI PLTSPQKVEL TVEKEVAGFW VKIPCVEQLG SCTYENVCDL 120
  121 IDQYIPPGET CPEPLHTYGL PCHCPFKEGT YSLPSSNFTV PDLELPSWLS TGNYRIQSIL 180
  181 SSGGKRLACI KIAASLKGR

Type	Start	End	Confidence
Signal Peptide	1	26	0.95
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	199	0.99