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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157818219, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSDRSALGR PGCAGSCLSS RASLLLLLLV LLDCLGGGTA SEDAEVYAAE NWLRLYGYLP  60
   61 QPSRHMSTMR SAQILASALA EMQSFYGIPV TGVLDEETKT WMKRPRCGVP DQFGVRVKAN 120
  121 LRRRRRRYTL TGKTWSNYHL TFSIQNYTEK LGWYNSMEAV RRAFQVWEQV TPLVFQEVPY 180
  181 DDIRLRRRAE ADIMVLFASG FHGDSSPFDG VGGFLAHAYF PGPGLGGDTH FDADEPWTFS 240
  241 STDLHGISLF LVAVHELGHA LGLEHSSNPS AIMAPFYQWM DTDNFQLPED DLRGIQQLYG 300
  301 SPDGKPQPTR PLPTVRPRRP GRPDHQPPRP PQPPHPGGKP ERPPKPGPPP QPRATERPDQ 360
  361 YGPNICDGNF DTVAVLRGEM FVFKGRWFWR VRHNRVLDNY PMPIGHFWRG LPGNISAAYE 420
  421 RQDGHFVFFK GNRYWLFREA NLEPGYPQPL SSYGTDIPYD RIDTAIWWEP TGHTFFFQAD 480
  481 RYWRFNEETQ HGDPGYPKPI SVWQGIPNSP KGAFLSNDAA YTYFYKGTKY WKFNNERLRM 540
  541 EPGHPKSILR DFMGCQEHVE PRSRWPDVAR PPFNPNGGAE PETEDDSKEE DVGDKDEGSR 600
  601 VVVQMEEVVR TVNVVMVLVP LLLLLCILGL AFALVQMQRK GAPRMLLYCK RSLQEWV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle