YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	6PGL_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPAPGLIS VFSSPQELGA SLAQLVAQRA ASCLEGNRGR FALGLSGGSL VSMLARDLPA  60
   61 ATAPAGPASF ARWTLGFCDE RLVPFDHAES TYGLYRTHLL SKLPIPDSQV LTIDPALPVE 120
  121 DAAEDYARKL RQAFQGDTVP VFDLLILGVG PDGHTCSLFP GHPLLQEREK IVAPIGDSPK 180
  181 PPPQRVTLTL PVLNAAQSVI FVATGEGKAA VLKRILEDQE SALPAAMVQP RTGALCWFLD 240
  241 EAAARLLSVP FEKHSTL

Type	Start	End	Confidence
Signal Peptide	1	23	0.87
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	257	0.99