YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ASCL1_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSGKMESG AGQQPQPPQP FLPPAACFFA TAAAAAAAAA AAAAQSAQQQ QQQQAPQQQA  60
   61 PQLSPVADGQ PSGGGHKSAA KQVKRQRSSS PELMRCKRRL NFSGFGYSLP QQQPAAVARR 120
  121 NERERNRVKL VNLGFATLRE HVPNGAANKK MSKVETLRSA VEYIRALQQL LDEHDAVSAA 180
  181 FQAGVLSPTI SPNYSNDLNS MAGSPVSSYS SDEGSYDPLS PEEQELLDFT NWF

Type	Start	End	Confidence
Signal Peptide	1	43	0.51
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	233	0.99