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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: THAS_RAT
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVLGLLKFE VSGTVVTVTL SVVLLALLKW YSTSAFSRLR KLGIRHPEPS PFVGNLMFFR  60
   61 QGFWESHLEL RERYGPLCGY YLGRRMYIVI SDPDMIKEVL VENFSNFSNR MASGLEPKLI 120
  121 ADSVLMLRDR RWEEVRGALM SAFSPEKLNE MTPLISQACE LLLSHLKHSA ASGDAFDIQR 180
  181 CYCCFTTNVV ASVAFGIEVN SQDAPEDPFV QHCQRVFAFS TPRPLLALIL SFPSIMVPLA 240
  241 RILPNKNRDE LNGFFNTLIR NVIALRDKQT AEERRGDFLQ MVLDAQRSMS SVGVEAFDMV 300
  301 TEALSSAECM GDPPQRCHPT STAKPLTVDE IAGQAFLFLI AGHEITTNTL SFITYLLATH 360
  361 PECQERLLKE VDLFMEKHPA PEYCNLQEGL PYLDMVVAET LRMYPPAFRF TREAAQDCEV 420
  421 LGQHIPAGSV LEIAVGALHH DPEHWPNPET FDPERFTAEA RLQQKPFTYL PFGAGPRSCL 480
  481 GVRLGLLVVK LTLLQVLHKF RFEACPETQV PLQLESKSAL CPKNGVYVKI VSR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle