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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCG5_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELPFLSPE GARGPHNNRG SQSSLEEGSV TGSEARHSLG VLNVSFSVSN RVGPWWNIKS  60
   61 CQQKWDRKIL KDVSLYIESG QTMCILGSSG SGKTTLLDAI SGRLRRTGTL EGEVFVNGCE 120
  121 LRRDQFQDCV SYLLQSDVFL SSLTVRETLR YTAMLALRSS SADFYDKKVE AVLTELSLSH 180
  181 VADQMIGNYN FGGISSGERR RVSIAAQLLQ DPKVMMLDEP TTGLDCMTAN HIVLLLVELA 240
  241 RRNRIVIVTI HQPRSELFHH FDKIAILTYG ELVFCGTPEE MLGFFNNCGY PCPEHSNPFD 300
  301 FYMDLTSVDT QSREREIETY KRVQMLESAF RQSDICHKIL ENIERTRHLK TLPMVPFKTK 360
  361 NPPGMFCKLG VLLRRVTRNL MRNKQVVIMR LVQNLIMGLF LIFYLLRVQN NMLKGAVQDR 420
  421 VGLLYQLVGA TPYTGMLNAV NLFPMLRAVS DQESQDGLYQ KWQMLLAYVL HALPFSIVAT 480
  481 VIFSSVCYWT LGLYPEVARF GYFSAALLAP HLIGEFLTLV LLGMVQNPNI VNSIVALLSI 540
  541 SGLLIGSGFI RNIEEMPIPL KILGYFTFQK YCCEILVVNE FYGLNFTCGG SNTSVPNNPM 600
  601 CSMTQGIQFI EKTCPGATSR FTTNFLILYS FIPTLVILGM VVFKVRDYLI SR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle