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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25244377
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLLALFYL LQLGPGLAAL SCPQNVNIVG GNFTLSRGWA PGSVLIYSCP LGRYPSPAWR  60
   61 ECQSNGQWQT PRASSLPTLR SSRLAKAVCK PVRCPAPTSF ENGIYIPRLG SYPVGGNLSF 120
  121 ECEHGFTLRG SPVRYCRPNG VWDGETAVCD NGASHCPNPG ISVGTMRTGS SFDLGDKVSY 180
  181 RCSSTNLVLT GSVERECLSN GVWSGSEPIC RQPYSYDFPE DVASALGTSF THLLGATNPI 240
  241 QKRTENLGRK IQILRSGHLN LYLLLDASQS VSEKDFNIFK ESAFLMVDRI FSFEIKVSVA 300
  301 IITFASRPKI IMSVLNERSQ NVMEVMDSLD SVCYKDHENA TGTNTYEALN SVYLMMNNQM 360
  361 DRLGMETSAW QEIRHAIILL TDGKSNMGGS PKPAVDNIRE ILGISRNRND YLDIYAIGVG 420
  421 KLDVDWKELN ELGSKKDGER HAFILQDAKA VQQVFEHILD VSKLTDTICG VGNMSVNASD 480
  481 QERTPWQVTF KPKSKETCQG SLISDQWVLT AAHCFHDAQM EDRHLWRVIV GDPTSHHGKE 540
  541 FHVEEVLVAP GFNVHAKQSQ GISEFYADDI ALLKLSQRVK MSSHARPICL PCTVGANMAL 600
  601 RRSPGSTCKD HETELLSQQK VPAHFVALNG NRMNINLRTG PERTSCIEAV SQNKGSFPGL 660
  661 TNVSEVVTDQ FLCSGMEGDD SPCKGESGGA VFLERRYRFF QVGLVSWGLF DPCHGSSNKN 720
  721 LRRKPPHGVV PRDFHISLFR LQPWLRQHLD GVLDFLPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle