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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62647031, gi|...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVFRSEEM CLSQVFLQVE AAYCCVAELG ELGLVQFKDL NANVNSFQRK FVNEVRRCES  60
   61 LERILRFLED EMQNEIIIQV PDKDPGTPLP REMITLETTL EKLEGELQEA NQSHQALKKS 120
  121 FLELTELKYL LKKTQDFFET ETNLGEDFFV EDTSGLLELR AMPAFMTGKL GFTAGVINRE 180
  181 RMASFERLLW RVCRGNVYLK FSEMDTLLED PVTKEEIKKN IFIIFYQGEQ LRLKIKKICD 240
  241 GFRATIYPCP EHAAERREML ASVNVRLEDL ITVITQTESH RQRLLQEAAS NWHSWVIKVQ 300
  301 KMKAVYHVLN MCNIDVTQQC IIAEIWFPVA DTRHIKKALE QGMELSGSSM VPIMTEVETK 360
  361 TDPPTFNRTN KFTAGFQNIV DAYGVGSYRE INPAPYTIIT FPFLFAVMFG DCGHGMVMLM 420
  421 AALWMVLNER HLLAQKSTNE MWNIFFNGRY LILLMGIFSI YTGLIYNDCF SKSFNIFGSS 480
  481 WSVQPMFRNG TWNAHVVEQN PYLQLDPAIP GVYSGNPYPF GIDPIWNLAS NKLTFLNSYK 540
  541 MKMSVILGIV HMIFGVILSL FNHIYFRRTL NIILQFIPEM IFMLSLFGYL VFMIIFKWCQ 600
  601 YDAHTSQKAP SILIHFIGMF LFDYDDSSNA PLYGHQQEVQ TFFVIIALVS VPWMLLIKPF 660
  661 ILRAKHQKSQ LQSFTIHEDA MEGPSVKKTA GAHGTKEGHE EEFNFGDIFV HQAIHTIEYC 720
  721 LGCISNTASY LRLWALSLAH AELSEVLWTM VMSIGLRLRG WGGLVGVFII FAVFAVLTVA 780
  781 ILLVMEGLSA FLHALRLHWV EFQNKFYEGA GFKFSPFSFK HVLEGAAEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle