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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2196784
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LERVRQLGQA LLLRLREVTH SVRIGFGSFV DKTVLPFVST VPSKLNHPCP SRLERCQAPF  60
   61 SYHHVLPLTR DAQAFEREVG RQNVSGNLDS PEGGFDAILQ AALCQEQIGW RNVSRLLVFT 120
  121 SDDTFHTAGD GKLGGIFMPS DGRCHLDSNG VYTNSAEFDY PSVGQVAQAL TAANIQPIFA 180
  181 VTGATLPVYQ ELSQLIPKSA VGELSEDSSN VVQLIMDAYD NLSSTVTLEH SSLPPGVSIS 240
  241 FESHCRSPEK SEGEAGDRRG QCNHVRVNRM VDFWVTLQAS HCLPEAHVLR LWALGFSEEL 300
  301 TVELHTLCDC NCSDAQPRAP YCSDGQGDLQ CGICSCAPGR LGQLCECSEA DLSSPDLESG 360
  361 CRAPNGTGPL CSGKGRCQCG HCSCSGQSSG RLCECDDASC ERHGGIFCGG FGHCQCGVCH 420
  421 CHANRTGRAC ECSESVDSCV SPEGGLCSGH GDCKCNRCQC LDGYYGALCD QCLGCKSPCE 480
  481 QYRDCAECGA FGTGPLAANC SAACADVNVT LALAPNLDDG WCKERTLDNQ LFFFLVENSA 540
  541 RGVILRVRPQ EKGADHTRAI ILGCVGGIVA VGLGLVLAYR LSVEVYDRLE YSRFEKERQQ 600
  601 LNWKQDSNPL YKSAVTTTVN PRFQGGNKQS LSLPLTQEAD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle