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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|213688377, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAVAAGT GSPAGTESAE GAPGSAAALE LWLNKATNPS MAEQDWSAIQ KFCEQVNTDP  60
   61 SGPTHAPWLL AHKIQSPQER EALYALTVLE ICMNHCGEKF HNEVAKFRFL NELIKVLSPK 120
  121 YLGAWATEKV KGRVIEILFS WTVWFPEDIK IRDAYQMLKK QGIIKQDPKL PMDKILPPPS 180
  181 PWPKSIFDAD EEKSKLLTRL LKSNHPEDLQ AANRLIKNLV KEEQEKSEKV SRRVSAVEEV 240
  241 RSHVRVLREM LSMYRRPGHA LPDQQALQVV YERCEKLRPT LFRLASDTTD DDDALAEILQ 300
  301 ANDLLTQGVL LYKQVVEGRV NAGNAVPAAV GAIPASRVFP SPEPCGKNCP LIDLEAPSLL 360
  361 HQDLAALGIN DVPTRNQVVI PSCCKDKKQP GAITLMGGGI QSLSADRNLL DLFSPQPSPG 420
  421 PLNYVPQKSI PKEVPPGTKA SPGWSWEAGP LASSPASQNT PLAHVFVPLE SVKPSSLPPI 480
  481 IVYDRNGFRI LLHFSQTGAP GHPDVQVLLL TMMSTATQPV WDVMFQVAVP KSMRVKLQPA 540
  541 SSSKLPAFSP LTPPAVISQM LLLDNPHKEP IRLRYKLTFN QGGQPFSEVG EVKDFPDLAV 600
  601 LSTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle