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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109473701, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVNVCYCC PWRLLLLHFL CSSSMGSPSP STDPEKKVGS QGLRFRLAGF PRKPYEGRVE  60
   61 IQRAGEWGTI CDDDFTLQAA HVLCRELGFT EATGWTHSAK YGPGTGRIWL DNLSCKGTEG 120
  121 SVTECASRGW GNSDCTHDED AGVICKDQRL PGFSDSNVIE VDHQLQVEEV RLRPAVEWGR 180
  181 RPLPVTEGLV EVRLPEGWSQ VCDKGWSAHN SHVVCGMLGF PGEKRVNMAF YRMLAQKKQH 240
  241 SFGLHSVACV GTEAHLSLCS LEFYRANDTT RCAGGSPAVV SCMLGPLYAT STGQKKQQHS 300
  301 KPQGEASVRL KGGAHPGEGR VEVLKAGTWG TVCDRKWDLQ AASVVCRELG FGTAREALSG 360
  361 ARMGQGMGAI HLSEVRCSGQ EPSLWKCPSK NITAEDCSHS QDAAVRCNLP YTGVETKIRL 420
  421 SGGRSRYEGR VEVQIGVPGH LRWGLICGDD WGTLEAMVAC RQLGLGYANH GLQETWYWDS 480
  481 GNVTEVVMSG VRCTGSELSL NQCAHHNTHV TCKRTGTRFT AGVICSETAS DLLLHSALVQ 540
  541 ETAYIEDRPL HMLYCAAEEN CLASSARSAN WPYGHRRLLR FSSQIHNLGR ADFRPKAGRH 600
  601 SWVWHECHGH YHSMDIFTHY DILTPNGTKV AEGHKASFCL EDTECQEDVS KRYECANFGE 660
  661 QGITVGCWDL YRHDIDCQWI DITDVKPGNY ILQVVINPNF EVAESDFTNN AMKCNCKYDG 720
  721 HRIWVHNCHI GDAFSEEANR RFERYPGQTS NQIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle