YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DHB11_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYLLDLILL LPLLIVFCIE SFIKRLIPKK KKSVAGEIVL ITGAGHGIGR LTAYEFAKLN  60
   61 TKLVLWDINK NGIEETAAKC RKLGAQVHPF VVDCSQREEI YSAVRKVKEE VGDVSILVNN 120
  121 AGVVYTADLF ATQDPQIEKT FEVNVLAHFW TTKAFLPAMM KNNHGHVVTV ASAAGHTVVP 180
  181 FLLAYCSSKF AAVGFHRALT DELAALGCTG VRTSCLCPNF INTGFIKNPS TNLGPTLEPE 240
  241 EVVEHLMHGI LTNQKMIFVP GSIALLTVLE RVFPERFLDV LKRRINVKFD AVVGYKDK

Type	Start	End	Confidence
Signal Peptide	1	18	0.83
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	298	0.88