YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|62655036, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSGEENLQ GSWVEQHFSN GNGSSIPASV SIYNGDMEKI LLDAQHESGR SSSKSSHCDS  60
   61 PPRSQTPQDT NRAEIDTHSF GEKNSTLSEE DYIERRREVE SILKKNSDWI WDWSSRPENV 120
  121 PHKEFLFKHP KRTATLSMRN TSVMKKGGIF SADFLKVFLP SLLLSHLLAI GLGIYIGRRL 180
  181 TTSTSTF

Type	Start	End	Confidence
Cytoplasmic	1	153	0.82
Transmembrane Helix	154	177	0.84
Non-Cytoplasmic	178	187	0.85