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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HACL1_RAT
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESNSAEGS DRSEEQVSGA KVIAQALKTQ DVEYMFGVVG IPVTEIALAA QELGIKYIGM  60
   61 RNEQAACYAA SAVGYLTGRP GVCLVVSGPG LIHALGGMAN ANMNCWPLIV IGGSSERNQE 120
  121 AMGAFQEFPQ VEACRLYSKF SARPSSIQHI PFVIEKAVRS SIYGRPGACY IDVPADLVTL 180
  181 QESTTSIKYK ECCMPPPLSL AETSAVRAAA SVLRSAKQPL LIIGKGAAYS HAEDSIRKLV 240
  241 ELCNLPFLPT PMGKGVVPDN HPNCVGAARS RALQFADVIV LFGARLNWIL HFGLPPRYQA 300
  301 DVKFIQIDIC AEELGNNVRP SVTLLGDVNA VSKQLLEQFV KNPWQYPTDS KWWETLREKR 360
  361 KNNEAVSKEL ASKKSLPMNY YTVFYHVQEQ LPRNCFIVSE GANTMDIGRT VLQNYLPRHR 420
  421 LDAGSFGTMG VGLGFAIAAA VVAKERSPGQ RVICVEGDSA FGFSGMEVET ICRYNLPIII 480
  481 LVVNNNGIYQ GFDADTWGKI LNFQGTATTI PPMCLLPNSH YEQVMTAFGG KGYFVQTPEE 540
  541 LQDSLRQALK DTSKPCLINI MIEPQSTRKA QDFHWLTRSN I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle